Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C804_04484WecB/TagA/CpsF family glycosyltransferase; Belongs to the glycosyltransferase 26 family. (250 aa)    
Predicted Functional Partners:
C804_04483
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 0.974
C804_04104
Hypothetical protein.
  
 0.957
C804_03101
Hypothetical protein.
   
 0.949
C804_04506
Undecaprenyl-phosphate glucose phosphotransferase.
  
 0.939
C804_00514
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.889
C804_04480
Hypothetical protein.
  
  
 0.775
C804_04485
Hypothetical protein.
       0.773
C804_01785
Hypothetical protein.
   
 0.744
C804_04128
Hypothetical protein.
  
 0.733
C804_03129
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
   
 0.702
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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