STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_04491Hypothetical protein. (1311 aa)    
Predicted Functional Partners:
C804_04486
Hypothetical protein.
 
     0.594
C804_00225
SrtB family sortase.
  
     0.526
C804_01649
Hypothetical protein.
  
     0.512
C804_04490
Hypothetical protein.
 
     0.507
C804_04478
Hypothetical protein.
 
     0.490
C804_06535
Hypothetical protein.
    
 0.489
C804_04492
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
       0.488
C804_00609
Hypothetical protein.
  
     0.486
C804_04514
Hypothetical protein.
 
     0.474
C804_02098
Hypothetical protein.
  
     0.470
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.