Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_04891Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. (472 aa)    
Predicted Functional Partners:
C804_04890
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.898
C804_01504
Hypothetical protein.
    
  0.892
C804_02676
Hypothetical protein.
  
 
  0.890
C804_01889
Hypothetical protein.
    
  0.863
C804_04829
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.825
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.798
C804_00345
Hypothetical protein.
   
 0.798
C804_00536
Acyl carrier protein.
   
 0.798
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.798
C804_04083
Acyl carrier protein.
   
 0.798
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.