STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CmpBABC transporter, permease protein; KEGG: ebe:B21_00321 1.3e-32 tauC; tauC, subunit of taurine ABC transporter K15552; Psort location: CytoplasmicMembrane, score: 10.00. (250 aa)    
Predicted Functional Partners:
CmpC
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_2019 5.4e-82 Taurine-transporting ATPase K02049; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.994
TauA
Hypothetical protein; KEGG: cyj:Cyan7822_3929 2.6e-11 nitrate ABC transporter ATPases C and D; K15578 nitrate/nitrite transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.984
CooS1
KEGG: vpr:Vpar_0209 0. carbon-monoxide dehydrogenase, catalytic subunit; K00198 carbon-monoxide dehydrogenase catalytic subunit; Psort location: Cytoplasmic, score: 9.97.
 
    0.483
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.