Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB87598.1Flavin reductase; KEGG: edi:EDI_276630 2.0e-26 elongation factor. (213 aa)    
Predicted Functional Partners:
KXB85310.1
4Fe-4S binding domain protein; KEGG: mba:Mbar_A3287 1.5e-29 nitroreductase; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.626
KXB87597.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: vpr:Vpar_1321 8.2e-63 protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
    0.559
KXB83805.1
Nitroreductase family protein; KEGG: fnu:FN1254 3.8e-26 dihydropteridine reductase K00540.
 
  
 0.503
KXB88866.1
Nitroreductase family protein; KEGG: fnu:FN1223 7.6e-12 dihydropteridine reductase K00540; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.496
KXB88899.1
Catalase; KEGG: vpr:Vpar_1745 4.2e-272 catalase domain-containing protein; K03781 catalase; Psort location: Periplasmic, score: 10.00; Belongs to the catalase family.
   
  
 0.467
BrkA
Outer membrane autotransporter barrel domain protein; KEGG: ssn:SSON_3223 1.2e-17 sigA; serine protease; K12684 serine protease autotransporter; Psort location: Extracellular, score: 9.46.
       0.438
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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