STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB87605.1Hypothetical protein; Belongs to the UPF0342 family. (129 aa)    
Predicted Functional Partners:
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.827
TrmL
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.657
KXB87603.1
Hypothetical protein; KEGG: npu:Npun_R5132 1.2e-10 iron-sulfur cluster binding protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.565
moaC
Molybdenum cofactor biosynthesis protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.494
KXB87731.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.488
typA
KEGG: cch:Cag_1518 1.8e-186 GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 7.88.
       0.444
KXB88186.1
Hypothetical protein; KEGG: lru:HMPREF0538_20279 2.1e-18 ppx3; exopolyphosphatase; Psort location: Cytoplasmic, score: 8.96.
 
     0.438
BrkA
Outer membrane autotransporter barrel domain protein; KEGG: ssn:SSON_3223 1.2e-17 sigA; serine protease; K12684 serine protease autotransporter; Psort location: Extracellular, score: 9.46.
 
     0.420
KXB87608.1
Metallo-beta-lactamase domain protein; KEGG: bqy:MUS_3211 3.4e-48 ytkL; metal dependent hydrolase; Belongs to the UPF0173 family.
       0.405
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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