Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FecDIron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: ebe:B21_04117 9.7e-44 fecD; fecD, subunit of iron dicitrate ABC transporter and ferric dicitrate uptake system K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (335 aa)    
Predicted Functional Partners:
FhuC
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE; KEGG: cbk:CLL_A1475 3.0e-49 iron chelate uptake ABC transporter FeCT family, ATP-binding protein; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.985
YclQ
Periplasmic binding protein; KEGG: ebe:B21_00156 1.6e-05 btuF; periplasmic vitamin B12 binding protein, subunit of vitamin B12 ABC transporter and vitamin B12 transport system.
 
 
 0.955
YusV
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: vpr:Vpar_1137 6.5e-125 ABC transporter; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.98.
 
 
 0.938
IsdE
Periplasmic binding protein; KEGG: ebe:B21_00548 2.0e-10 fepB; fepB, subunit of ferric enterobactin ABC transporter and Ferric Enterobactin Transport System K02016; Psort location: CytoplasmicMembrane, score: 9.97.
 
 
 0.880
KXB87002.1
KEGG: pfe:PSF113_4983 0.0037 periplasmic hemin-binding protein K02016.
 
 
 0.758
KXB87001.1
Periplasmic binding protein; KEGG: pfe:PSF113_4983 0.00015 periplasmic hemin-binding protein K02016.
 
 
 0.603
CysG_1
KEGG: vpr:Vpar_1424 1.5e-253 uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.501
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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