Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB87522.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
KXB87521.1
Hypothetical protein; KEGG: cai:Caci_5966 1.2e-14 asparagine synthase K01953; Psort location: Cytoplasmic, score: 8.96.
 
     0.945
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.815
KXB87524.1
KEGG: vpr:Vpar_0429 4.6e-69 thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase.
       0.815
KXB87534.1
Hypothetical protein; KEGG: bcx:BCA_5324 0.0034 putative cell wall endopeptidase, NlpC/P60 family; Psort location: OuterMembrane, score: 9.49.
 
     0.801
KXB87533.1
Hypothetical protein; KEGG: ppo:PPM_2023 2.0e-21 vanT; serine/alanine racemase Vancomycin C-type resistance protein vanT; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.792
KXB83917.1
OstA-like protein; Psort location: OuterMembrane, score: 9.52.
  
     0.774
KXB83555.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.774
KXB82966.1
OstA-like protein; KEGG: pfe:PSF113_0944 0.0019 lptA; protein LptA K09774.
  
     0.774
KXB83621.1
Hypothetical protein.
  
     0.772
KXB82989.1
Hypothetical protein; KEGG: bme:BMEI1894 1.1e-13 gramicidin S biosynthesis grsT protein K09800; Psort location: OuterMembrane, score: 9.49.
  
     0.771
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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