Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB87400.1Putative pyruvate carboxylase subunit B; KEGG: vpr:Vpar_0396 2.6e-240 carboxylase; K01571 oxaloacetate decarboxylase, alpha subunit; Psort location: Cytoplasmic, score: 9.97. (450 aa)    
Predicted Functional Partners:
GcdB
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
 
 0.979
GcdC
KEGG: ain:Acin_0297 1.4e-35 mmdC; glutaconyl-CoA decarboxylase subunit gamma.
   
 0.965
PorA_1
KEGG: vpr:Vpar_1390 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.946
Pyk
Pyruvate kinase; KEGG: vpr:Vpar_1405 7.4e-291 pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.939
PorA_2
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: vpr:Vpar_1461 0. pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.933
CfiB
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
  
0.928
LdhB
Putative L-lactate dehydrogenase; KEGG: vpr:Vpar_0498 3.1e-150 lactate/malate dehydrogenase; K00016 L-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
    
 0.914
PpsA
Pyruvate, water dikinase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.913
KXB82491.1
KEGG: vpr:Vpar_0207 1.7e-284 phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP); Psort location: Cytoplasmic, score: 8.96.
    
 0.913
PorB
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; KEGG: vpr:Vpar_1460 1.6e-153 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
   
 
 0.910
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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