Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GsiBKEGG: dvm:DvMF_2402 2.0e-30 nickel ABC transporter substrate-binding protein K15584; Psort location: Periplasmic, score: 10.00. (494 aa)    
Predicted Functional Partners:
NikB
Putative oligopeptide ABC transporter, permease protein AppB; KEGG: bmi:BMEA_B0782 1.5e-47 nikB; nickel transporter permease NikB K15585; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
GsiD_1
ABC transporter, permease protein; KEGG: bmi:BMEA_B0781 1.2e-54 nikC; nickel transporter permease NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
KXB86843.1
Dipeptide ABC transporter, ATP-binding protein DppD family protein; KEGG: smq:SinmeB_6296 7.4e-46 Phosphate-transporting ATPase., Nickel-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
GsiA_2
Putative oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: ssg:Selsp_1124 3.8e-42 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.989
GsiD_2
Putative D,D-dipeptide transport system permease protein DdpC; KEGG: bmq:BMQ_1717 2.1e-57 nikC; nickel import ABC transporter permease subunit NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
 0.989
GsiC
ABC transporter, permease protein; KEGG: ppy:PPE_02431 2.4e-63 nickel transporter permease nikB K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
GsiA_6
Oligopeptide transport ATP-binding protein OppD family protein; KEGG: ssg:Selsp_1123 2.1e-64 Nickel-transporting ATPase K02031; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.972
GsiA_5
Putative oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: ssg:Selsp_1124 1.4e-67 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.967
NikA_2
ABC transporter, substrate-binding protein, family 5; KEGG: smd:Smed_3647 2.6e-43 4-phytase K02035; Psort location: Periplasmic, score: 9.76.
  
  
 
0.916
OppC
Oligopeptide ABC transporter, permease protein OppC; KEGG: pfe:PSF113_0787 2.4e-47 dppC; protein DppC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.842
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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