STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CbiFKEGG: vpr:Vpar_1143 2.4e-127 precorrin-4 C(11)-methyltransferase; K05936 precorrin-4 C11-methyltransferase; Psort location: Cytoplasmic, score: 9.97. (253 aa)    
Predicted Functional Partners:
KXB86602.1
CbiG protein; KEGG: vpr:Vpar_1142 1.3e-188 cobalamin (vitamin B12) biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
 0.999
CbiH
KEGG: vpr:Vpar_1141 4.7e-115 precorrin-3B C(17)-methyltransferase; K05934 precorrin-3B C17-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
cbiT
KEGG: vpr:Vpar_1144 1.2e-98 precorrin-6Y C5,15-methyltransferase subunit CbiT; K02191 cobalt-precorrin-7 (C15)-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 0.993
CobK
precorrin-6A reductase; KEGG: vpr:Vpar_1140 7.4e-133 precorrin-6x reductase; K05895 precorrin-6X reductase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.988
CobH
KEGG: vpr:Vpar_1139 2.4e-111 precorrin-8X methylmutase CbiC/CobH; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.987
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.984
cbiE
KEGG: vpr:Vpar_1145 6.8e-107 precorrin-6y C5,15-methyltransferase subunit CbiE; K03399 precorrin-6Y C5,15-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
0.935
CbiL
Precorrin-2 C(20)-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.
 
  
0.935
CbiKp
Cobalt chelatase; KEGG: vpr:Vpar_1131 6.8e-146 anaerobic cobalt chelatase; K02190 sirohydrochlorin cobaltochelatase; Psort location: Cytoplasmic, score: 8.96.
  
 0.875
CbiK_1
Sirohydrochlorin cobaltochelatase family protein; KEGG: vpr:Vpar_1135 4.7e-170 anaerobic cobalt chelatase; K02190 sirohydrochlorin cobaltochelatase.
  
 0.860
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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