Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YdhDHypothetical protein; KEGG: bmq:BMQ_1498 1.8e-42 glycosyl hydrolase family 18 protein. (571 aa)    
Predicted Functional Partners:
KXB85319.1
Hypothetical protein; KEGG: cow:Calow_2109 7.8e-17 pectate disaccharide-lyase.
 
     0.676
Ctc
Hypothetical protein; KEGG: pjd:Pjdr2_0951 3.0e-15 licheninase.
  
     0.666
leuS
leucine--tRNA ligase; KEGG: vpr:Vpar_0964 0. leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.543
RibD_1
Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: vpr:Vpar_0963 1.8e-81 CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase.
 
     0.534
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.533
KXB83808.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.490
KXB83811.1
Hypothetical protein.
  
     0.474
KXB83886.1
KEGG: raa:Q7S_22080 1.4e-08 O-antigen polymerase; K02847 O-antigen ligase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.439
KXB83197.1
Hypothetical protein; KEGG: vpr:Vpar_0584 1.3e-174 glutathionylspermidine synthase; K01917 glutathionylspermidine synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.405
KXB83199.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.400
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.