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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB86338.1Putative aminopeptidase II; KEGG: vpr:Vpar_0962 1.8e-209 peptidase M29 aminopeptidase II; K01269 aminopeptidase; Psort location: Cytoplasmic, score: 8.96. (409 aa)    
Predicted Functional Partners:
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.577
KXB86340.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 5.8e-09 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
       0.552
KXB86339.1
comEA protein; KEGG: hor:Hore_06940 2.9e-10 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.82.
       0.551
KXB86341.1
KEGG: vpr:Vpar_0959 1.4e-168 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
       0.543
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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