STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UppP_1Hypothetical protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP); Belongs to the UppP family. (92 aa)    
Predicted Functional Partners:
KXB85749.1
Hypothetical protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP); Belongs to the UppP family.
 
     0.939
KXB85750.1
Hypothetical protein; KEGG: ptr:456963 0.0013 AK5; adenylate kinase 5; K00939 adenylate kinase; Psort location: Cytoplasmic, score: 8.96.
       0.569
hypB
Hydrogenase accessory protein HypB; KEGG: cgl:NCgl0088 3.2e-13 Cgl0089; Ni2+-binding GTPase K03189; Psort location: Cytoplasmic, score: 9.97.
     
 0.519
KXB85751.1
Hypothetical protein.
       0.510
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.504
hypA
Putative hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.490
PenA
KEGG: vpr:Vpar_1520 0. penicillin-binding protein transpeptidase; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.414
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.