Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB85793.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (150 aa)    
Predicted Functional Partners:
SseA
Rhodanese-like protein; KEGG: aad:TC41_0962 2.7e-48 sseA; Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase; Psort location: Cytoplasmic, score: 9.97.
       0.441
KXB85791.1
Hypothetical protein.
       0.430
KXB85794.1
Putative CTP pyrophosphohydrolase; KEGG: vpr:Vpar_1556 1.6e-59 NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.420
KXB85795.1
Phage tail component protein; KEGG: aai:AARI_31700 9.5e-156 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
       0.420
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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