Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PtsHKEGG: sri:SELR_26700 3.0e-17 hpr; putative phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 9.26. (86 aa)    
Predicted Functional Partners:
PtsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 0.999
FruA
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: vpr:Vpar_1578 0. PTS system fructose subfamily transporter subunit IIC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.986
UlaC
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: vpr:Vpar_1348 4.3e-73 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.932
UlaB
KEGG: vpr:Vpar_1347 3.0e-40 PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component; Psort location: Cytoplasmic, score: 8.96.
    
 0.908
UlaA
KEGG: bmq:BMQ_1023 4.0e-118 putative sugar-specific permease K03475; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.905
LacC
1-phosphofructokinase; KEGG: vpr:Vpar_1577 5.5e-144 1-phosphofructokinase; K00882 1-phosphofructokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.673
Pyk
Pyruvate kinase; KEGG: vpr:Vpar_1405 7.4e-291 pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.594
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
    0.533
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
  
    0.524
TufA
KEGG: ain:Acin_2215 9.9e-177 tufA; translation elongation factor Tu K02358; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.445
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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