STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BtrTranscriptional regulator, AraC family; KEGG: rcp:RCAP_rcc02198 7.2e-16 histidine kinase; Psort location: Cytoplasmic, score: 9.97. (335 aa)    
Predicted Functional Partners:
KXB87747.1
KEGG: pjd:Pjdr2_5110 1.1e-16 AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
     0.768
PduC
KEGG: ssa:SSA_0533 6.9e-240 pduC; glycerol dehydratase large subunit pduC K01699; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.696
KXB85432.1
ATP:cob(I)alamin adenosyltransferase; KEGG: lml:lmo4a_1147 1.7e-71 pduO; porpanediol utilization protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.649
pduD
KEGG: ssa:SSA_0535 7.0e-73 propanediol utilization: dehydratase, medium subunit K13919; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.643
EutL_2
Propanediol utilization protein PduB.
 
   
 0.642
KXB85426.1
Propanediol utilization protein PduB.
 
   
 0.561
PduE
Glycerol dehydratase, small subunit family protein; KEGG: ssa:SSA_0536 3.5e-46 B12-dependent diol dehydratase small subunit K13920; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.557
KXB85433.1
Propanediol utilization protein PduH family protein.
 
     0.539
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.537
DdrA
KEGG: lru:HMPREF0538_20930 1.5e-214 pduC; propanediol dehydratase large subunit; Psort location: Cytoplasmic, score: 8.96.
 
     0.533
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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