Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB85303.1Hypothetical protein; KEGG: ccv:CCV52592_0405 1.6e-18 ribonuclease HII K01163; Psort location: Cytoplasmic, score: 8.96. (270 aa)    
Predicted Functional Partners:
KXB85302.1
Acetyltransferase, GNAT family; KEGG: bcz:BCZK2672 1.8e-26 acetyltransferase K00680.
     0.912
GloA
Glyoxalase family protein; KEGG: vpr:Vpar_1373 3.1e-63 glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 9.26.
  
     0.700
KXB88937.1
Hypothetical protein; KEGG: fnu:FN1387 1.2e-24 metal dependent hydrolase K01567.
  
    0.671
RluD_4
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.536
MdtE
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 4.1e-08 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.464
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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