STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LutBIron-sulfur cluster-binding protein; KEGG: bqy:MUS_3742 8.5e-116 ykgF; heterodisulfide reductase; Psort location: Cytoplasmic, score: 8.96. (481 aa)    
Predicted Functional Partners:
LutA
Cysteine-rich domain protein; KEGG: bpu:BPUM_1672 2.6e-66 yvfV; (S)-2-hydroxy-acid oxidase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.998
LutC
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.988
KXB88877.1
FAD linked oxidase protein; KEGG: hac:Hac_1598 5.1e-228 dld; D-lactate dehydrogenase K00102; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.871
PorA_1
KEGG: vpr:Vpar_1390 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.764
GlcA
Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.694
PorA_2
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: vpr:Vpar_1461 0. pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
   
  
 0.428
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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