Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB84986.1Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 3.0e-33 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (357 aa)    
Predicted Functional Partners:
KXB84344.1
comF family protein; KEGG: chu:CHU_3495 1.9e-08 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 8.96.
   
    0.501
SpoIIIE
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 2.4e-115 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.471
KXB84985.1
Hypothetical protein.
       0.459
TyrC
Prephenate dehydrogenase; KEGG: abs:AZOBR_p1130164 1.0e-39 tyrC; cyclohexadienyl dehydrogenase; K00220 cyclohexadieny/prephenate dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
  
    0.438
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.429
KXB85909.1
Hypothetical protein; KEGG: epr:EPYR_02197 0.0081 SPBc2 prophage-derived uncharacterized transglycosylase yomI; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.412
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.407
PurR
KEGG: ppo:PPM_0031 8.7e-59 purR9; purine operon repressor K09685; Psort location: Cytoplasmic, score: 9.97.
   
    0.407
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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