Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dxs_2Transketolase, pyridine binding domain protein; KEGG: vpr:Vpar_0806 1.3e-151 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97. (310 aa)    
Predicted Functional Partners:
TktA
Transketolase, thiamine diphosphate binding domain protein; KEGG: vpr:Vpar_0805 1.3e-142 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
 0.999
Rpe
KEGG: vpr:Vpar_0855 2.6e-105 ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.950
tal
Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.927
RpiB
Ribose-5-phosphate isomerase B; KEGG: vpr:Vpar_1094 1.7e-69 RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B; Psort location: Cytoplasmic, score: 8.96.
    
 0.915
Fba
Fructose-1,6-bisphosphate aldolase, class II; KEGG: vpr:Vpar_1150 2.6e-160 fructose-1,6-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II; Psort location: Cytoplasmic, score: 9.97.
    
  0.908
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: vpr:Vpar_1090 2.1e-176 glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
  0.908
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
  0.907
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.904
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
  0.902
KXB86535.1
Putative 6-phosphofructokinase isozyme 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
    
  0.902
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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