Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GalE_1KEGG: vpr:Vpar_0659 3.8e-168 UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)    
Predicted Functional Partners:
GalE_3
KEGG: vpr:Vpar_0032 1.2e-100 NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97.
 
0.962
GtaB
KEGG: vpr:Vpar_0648 7.0e-144 UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.962
Ugd
KEGG: vpr:Vpar_0683 1.2e-194 nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.933
KXB85328.1
Hypothetical protein; KEGG: bce:BC0237 9.8e-51 galactose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.904
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
   
 0.878
Pgi
KEGG: vpr:Vpar_0658 1.7e-245 phosphoglucose isomerase; K01810 glucose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.874
KXB83907.1
Hypothetical protein; KEGG: ctc:CTC01157 6.3e-05 phosphoesterase K01175; Psort location: CytoplasmicMembrane, score: 10.00.
       0.567
ybaK
YbaK/EbsC protein; KEGG: bya:BANAU_2580 8.0e-33 yjdI; prolyl-tRNA synthetase K03976; Psort location: Cytoplasmic, score: 9.26; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.544
KXB83850.1
KEGG: cbe:Cbei_4754 6.6e-148 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.533
KXB83903.1
Bacterial type II and III secretion system protein; Psort location: OuterMembrane, score: 10.00; Belongs to the bacterial secretin family.
       0.517
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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