STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB83805.1Nitroreductase family protein; KEGG: fnu:FN1254 3.8e-26 dihydropteridine reductase K00540. (173 aa)    
Predicted Functional Partners:
KXB88866.1
Nitroreductase family protein; KEGG: fnu:FN1223 7.6e-12 dihydropteridine reductase K00540; Psort location: Cytoplasmic, score: 8.96.
  
     0.728
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.613
KXB85310.1
4Fe-4S binding domain protein; KEGG: mba:Mbar_A3287 1.5e-29 nitroreductase; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.585
KXB87598.1
Flavin reductase; KEGG: edi:EDI_276630 2.0e-26 elongation factor.
 
  
 0.506
KXB83806.1
Outer membrane protein.
       0.466
GloA
Glyoxalase family protein; KEGG: vpr:Vpar_1373 3.1e-63 glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 9.26.
  
    0.455
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.416
mce
KEGG: vpr:Vpar_1245 1.9e-70 methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase; Psort location: Cytoplasmic, score: 8.96.
   
    0.408
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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