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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CstACarbon starvation protein A-like protein; Psort location: CytoplasmicMembrane, score: 10.00. (634 aa)    
Predicted Functional Partners:
SglT
Transporter, SSS family; KEGG: hiq:CGSHiGG_00405 3.5e-23 cytidine deaminase K11928; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.640
PutP
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.592
KXB82605.1
Hypothetical protein; KEGG: faa:HMPREF0389_00695 0.0038 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
       0.490
KXB82603.1
Hypothetical protein; KEGG: lpl:lp_2554 8.9e-18 hisF; Imidazole glycerol phosphate synthase cyclase subunit; K02500 cyclase; Psort location: Periplasmic, score: 9.81; Belongs to the HisA/HisF family.
       0.458
SucD
Aldehyde dehydrogenase family protein; KEGG: lml:lmo4a_1148 1.1e-147 pduP; propanediol utilization, Co-A dependent propionaldehyde dehydrogenase K13922; Psort location: Cytoplasmic, score: 8.96.
   
    0.443
AldA
KEGG: mas:Mahau_2111 2.9e-177 aldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
    0.443
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
   
    0.424
RbsC
KEGG: ppy:PPE_02484 5.9e-108 ribose transporter permease rbsC K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
   
    0.408
RbsA
KEGG: vpr:Vpar_0107 5.9e-250 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
   
    0.408
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
   
    0.408
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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