STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB82619.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (221 aa)    
Predicted Functional Partners:
KXB82616.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.535
KXB82617.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0246 family.
       0.535
BioB_1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: vpr:Vpar_0148 6.6e-196 radical SAM protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 8.96.
       0.535
fusA-2
KEGG: ddf:DEFDS_1534 5.4e-153 translation elongation factor G K02355; Psort location: Cytoplasmic, score: 9.97.
       0.488
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.