Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB82626.1KEGG: vpr:Vpar_0154 6.6e-196 amidase; K06016 N-carbamoyl-L-amino-acid hydrolase; Psort location: Cytoplasmic, score: 8.96. (414 aa)    
Predicted Functional Partners:
KXB87785.1
D-phenylhydantoinase domain protein; KEGG: vpr:Vpar_1266 1.6e-112 dihydropyrimidinase; K01464 dihydropyrimidinase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.951
AldA
KEGG: mas:Mahau_2111 2.9e-177 aldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.903
IaaH
Amidohydrolase; KEGG: bbe:BBR47_08250 3.2e-93 abgA; aminobenzoyl-glutamate utilization protein A K12940; Psort location: Cytoplasmic, score: 8.96.
 
     0.611
KXB87717.1
D-phenylhydantoinase domain protein; KEGG: vpr:Vpar_1266 4.0e-93 dihydropyrimidinase; K01464 dihydropyrimidinase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.545
DcuD_1
Transporter, anaerobic C4-dicarboxylate uptake C family; KEGG: ccv:CCV52592_2073 8.7e-75 orotate phosphoribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.498
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.424
argG
KEGG: vpr:Vpar_1568 3.9e-214 argininosuccinate synthase; K01940 argininosuccinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.420
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
  
 
 0.408
Your Current Organism:
Veillonella dispar
NCBI taxonomy Id: 39778
Other names: ATCC 17748, DSM 20735, NCTC 11831, V. dispar, Veillonella alcalescens subsp. dispar
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