STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB77355.1methylmalonyl-CoA epimerase. (152 aa)    
Predicted Functional Partners:
SMB81169.1
methylmalonyl-CoA mutase.
 
  
 0.984
SMB81165.1
methylmalonyl-CoA mutase.
 
  
 0.971
SMB85195.1
Biotin carboxyl carrier protein /biotin carboxylase.
  
 
 0.934
SMB81173.1
LAO/AO transport system kinase.
     0.902
SMB85594.1
methylmalonyl-CoA carboxyltransferase 5S subunit.
    
  0.882
SMB85236.1
propionyl-CoA carboxylase beta chain.
 
 
 0.812
SMB78817.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.801
SMB85603.1
methylmalonyl-CoA carboxyltransferase 12S subunit.
 
 
 0.787
SMB80129.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.787
SMB78825.1
Mycolic acid condensase.
    
 0.719
Your Current Organism:
Corynebacterium glucuronolyticum
NCBI taxonomy Id: 39791
Other names: ATCC 51860, ATCC:51866 [[Corynebacterium seminale]], C. glucuronolyticum, CCUG 35055, CCUG:34780 [[Corynebacterium seminale]], CCUG:34888 [[Corynebacterium seminale]], CIP 104577, CIP:104297 [[Corynebacterium seminale]], Corynebacterium seminale, DMMZ 838, DSM 44120, DSM 44288 [[Corynebacterium seminale]], JCM 11612, JCM:10394 [[Corynebacterium seminale]], LMG 19047, LMG:19047, strain IBS B12915 [[Corynebacterium seminale]]
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