Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMB77422.1 | SMB77423.1 | SAMN05660745_00072 | SAMN05660745_00073 | Hypothetical protein. | Hypothetical protein. | 0.820 |
SMB77422.1 | SMB77623.1 | SAMN05660745_00072 | SAMN05660745_00278 | Hypothetical protein. | PTS system sucrose-specific IIA component, Glc family /PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family. | 0.459 |
SMB77422.1 | SMB78929.1 | SAMN05660745_00072 | SAMN05660745_02093 | Hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.535 |
SMB77422.1 | SMB79024.1 | SAMN05660745_00072 | SAMN05660745_02126 | Hypothetical protein. | Hypothetical protein. | 0.755 |
SMB77422.1 | SMB80956.1 | SAMN05660745_00072 | SAMN05660745_00692 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.619 |
SMB77422.1 | SMB82659.1 | SAMN05660745_00072 | SAMN05660745_00869 | Hypothetical protein. | PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family. | 0.441 |
SMB77422.1 | SMB86893.1 | SAMN05660745_00072 | SAMN05660745_01786 | Hypothetical protein. | D-lactate dehydrogenase. | 0.473 |
SMB77422.1 | ribBA | SAMN05660745_00072 | SAMN05660745_00694 | Hypothetical protein. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.469 |
SMB77423.1 | SMB77422.1 | SAMN05660745_00073 | SAMN05660745_00072 | Hypothetical protein. | Hypothetical protein. | 0.820 |
SMB77423.1 | SMB77623.1 | SAMN05660745_00073 | SAMN05660745_00278 | Hypothetical protein. | PTS system sucrose-specific IIA component, Glc family /PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family. | 0.598 |
SMB77423.1 | SMB78929.1 | SAMN05660745_00073 | SAMN05660745_02093 | Hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.473 |
SMB77423.1 | SMB79024.1 | SAMN05660745_00073 | SAMN05660745_02126 | Hypothetical protein. | Hypothetical protein. | 0.662 |
SMB77423.1 | SMB80956.1 | SAMN05660745_00073 | SAMN05660745_00692 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.619 |
SMB77423.1 | SMB82659.1 | SAMN05660745_00073 | SAMN05660745_00869 | Hypothetical protein. | PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family. | 0.582 |
SMB77423.1 | SMB84293.1 | SAMN05660745_00073 | SAMN05660745_01170 | Hypothetical protein. | Hypothetical protein. | 0.446 |
SMB77423.1 | SMB84296.1 | SAMN05660745_00073 | SAMN05660745_01171 | Hypothetical protein. | Uncharacterized protein; PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.5). | 0.505 |
SMB77423.1 | SMB86893.1 | SAMN05660745_00073 | SAMN05660745_01786 | Hypothetical protein. | D-lactate dehydrogenase. | 0.473 |
SMB77423.1 | ribBA | SAMN05660745_00073 | SAMN05660745_00694 | Hypothetical protein. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.469 |
SMB77623.1 | SMB77422.1 | SAMN05660745_00278 | SAMN05660745_00072 | PTS system sucrose-specific IIA component, Glc family /PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family. | Hypothetical protein. | 0.459 |
SMB77623.1 | SMB77423.1 | SAMN05660745_00278 | SAMN05660745_00073 | PTS system sucrose-specific IIA component, Glc family /PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family. | Hypothetical protein. | 0.598 |
page 1 of 4