Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMB77491.1 | SMB79230.1 | SAMN05660745_00141 | SAMN05660745_02178 | Fructose-1,6-bisphosphatase II. | Glucokinase. | 0.907 |
SMB77491.1 | SMB80990.1 | SAMN05660745_00141 | SAMN05660745_00703 | Fructose-1,6-bisphosphatase II. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.908 |
SMB77491.1 | SMB81016.1 | SAMN05660745_00141 | SAMN05660745_00713 | Fructose-1,6-bisphosphatase II. | Transketolase; Belongs to the transketolase family. | 0.963 |
SMB77491.1 | SMB81583.1 | SAMN05660745_00141 | SAMN05660745_02448 | Fructose-1,6-bisphosphatase II. | Fructokinase. | 0.882 |
SMB77491.1 | SMB86493.1 | SAMN05660745_00141 | SAMN05660745_01657 | Fructose-1,6-bisphosphatase II. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.921 |
SMB77491.1 | pfkA | SAMN05660745_00141 | SAMN05660745_02259 | Fructose-1,6-bisphosphatase II. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.913 |
SMB77491.1 | pgi | SAMN05660745_00141 | SAMN05660745_00231 | Fructose-1,6-bisphosphatase II. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.911 |
SMB77491.1 | pgl | SAMN05660745_00141 | SAMN05660745_00709 | Fructose-1,6-bisphosphatase II. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.904 |
SMB77491.1 | tal | SAMN05660745_00141 | SAMN05660745_00712 | Fructose-1,6-bisphosphatase II. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.920 |
SMB77491.1 | zwf | SAMN05660745_00141 | SAMN05660745_00711 | Fructose-1,6-bisphosphatase II. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.865 |
SMB79230.1 | SMB77491.1 | SAMN05660745_02178 | SAMN05660745_00141 | Glucokinase. | Fructose-1,6-bisphosphatase II. | 0.907 |
SMB79230.1 | SMB80990.1 | SAMN05660745_02178 | SAMN05660745_00703 | Glucokinase. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.865 |
SMB79230.1 | SMB81016.1 | SAMN05660745_02178 | SAMN05660745_00713 | Glucokinase. | Transketolase; Belongs to the transketolase family. | 0.887 |
SMB79230.1 | SMB86493.1 | SAMN05660745_02178 | SAMN05660745_01657 | Glucokinase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.887 |
SMB79230.1 | pfkA | SAMN05660745_02178 | SAMN05660745_02259 | Glucokinase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.498 |
SMB79230.1 | pgi | SAMN05660745_02178 | SAMN05660745_00231 | Glucokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.953 |
SMB79230.1 | pgl | SAMN05660745_02178 | SAMN05660745_00709 | Glucokinase. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.901 |
SMB79230.1 | tal | SAMN05660745_02178 | SAMN05660745_00712 | Glucokinase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.894 |
SMB79230.1 | zwf | SAMN05660745_02178 | SAMN05660745_00711 | Glucokinase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.983 |
SMB80990.1 | SMB77491.1 | SAMN05660745_00703 | SAMN05660745_00141 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Fructose-1,6-bisphosphatase II. | 0.908 |
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