STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB77594.1Recombinase zinc beta ribbon domain-containing protein. (243 aa)    
Predicted Functional Partners:
SMB77591.1
Energy-coupling factor transport system substrate-specific component.
 
     0.806
SMB77590.1
Energy-coupling factor transport system permease protein.
 
    0.803
SMB77593.1
ATP-binding cassette, subfamily B.
 
     0.778
SMB77592.1
ATP-binding cassette, subfamily B.
 
     0.774
SMB82721.1
Hypothetical protein.
  
     0.770
SMB82300.1
Protein of unknown function.
  
     0.738
SMB82298.1
Protein of unknown function.
  
     0.736
SMB81462.1
DNA polymerase.
  
     0.734
SMB82725.1
Prophage antirepressor.
 
     0.733
SMB83450.1
DNA polymerase.
  
     0.731
Your Current Organism:
Corynebacterium glucuronolyticum
NCBI taxonomy Id: 39791
Other names: ATCC 51860, ATCC:51866 [[Corynebacterium seminale]], C. glucuronolyticum, CCUG 35055, CCUG:34780 [[Corynebacterium seminale]], CCUG:34888 [[Corynebacterium seminale]], CIP 104577, CIP:104297 [[Corynebacterium seminale]], Corynebacterium seminale, DMMZ 838, DSM 44120, DSM 44288 [[Corynebacterium seminale]], JCM 11612, JCM:10394 [[Corynebacterium seminale]], LMG 19047, LMG:19047, strain IBS B12915 [[Corynebacterium seminale]]
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