STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB82773.1Uncharacterized protein YPO0396. (1118 aa)    
Predicted Functional Partners:
SMB82765.1
Protein of unknown function.
 
   0.999
SMB82767.1
Protein of unknown function.
 
 
   0.986
SMB82783.1
Hypothetical protein.
 
     0.962
SMB81142.1
Cell wall-associated hydrolases (invasion-associated proteins).
  
   0.906
SMB82785.1
Hypothetical protein.
       0.671
SMB80960.1
Riboflavin synthase alpha chain.
      
 0.627
SMB82789.1
Protein of unknown function.
       0.577
SMB82762.1
Hypothetical protein.
       0.543
Your Current Organism:
Corynebacterium glucuronolyticum
NCBI taxonomy Id: 39791
Other names: ATCC 51860, ATCC:51866 [[Corynebacterium seminale]], C. glucuronolyticum, CCUG 35055, CCUG:34780 [[Corynebacterium seminale]], CCUG:34888 [[Corynebacterium seminale]], CIP 104577, CIP:104297 [[Corynebacterium seminale]], Corynebacterium seminale, DMMZ 838, DSM 44120, DSM 44288 [[Corynebacterium seminale]], JCM 11612, JCM:10394 [[Corynebacterium seminale]], LMG 19047, LMG:19047, strain IBS B12915 [[Corynebacterium seminale]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.