STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB83137.1[NiFe]-hydrogenase II apoprotein, large subunit. (584 aa)    
Predicted Functional Partners:
SMB83131.1
[NiFe]-hydrogenase II apoprotein, small subunit.
 
 0.999
SMB83138.1
Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
 0.999
SMB83141.1
Hydrogenase maturation protease.
 
 0.986
SMB83127.1
Hydrogenase nickel incorporation protein HypB.
 
   
 0.954
SMB83123.1
Hydrogenase-3 nickel incorporation protein HypA.
  
 
 0.943
SMB83118.1
Hydrogenase maturation protein, carbamoyltransferase HypF.
 
 
 
 0.864
SMB83108.1
Hydrogenase maturation protein HypD.
 
 
 0.811
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
 
 0.805
SMB83148.1
F420-non-reducing hydrogenase subunit A.
 
 
 0.736
SMB83105.1
Hydrogenase maturation protein HypC.
 
 
 0.731
Your Current Organism:
Corynebacterium glucuronolyticum
NCBI taxonomy Id: 39791
Other names: ATCC 51860, ATCC:51866 [[Corynebacterium seminale]], C. glucuronolyticum, CCUG 35055, CCUG:34780 [[Corynebacterium seminale]], CCUG:34888 [[Corynebacterium seminale]], CIP 104577, CIP:104297 [[Corynebacterium seminale]], Corynebacterium seminale, DMMZ 838, DSM 44120, DSM 44288 [[Corynebacterium seminale]], JCM 11612, JCM:10394 [[Corynebacterium seminale]], LMG 19047, LMG:19047, strain IBS B12915 [[Corynebacterium seminale]]
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