STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB82161.1Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
SMB82163.1
Hypothetical protein.
 
   
 0.960
trmB
tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.955
SMB82162.1
Putative drug exporter of the RND superfamily.
 
  
 0.881
SMB77446.1
Putative zinc-finger.
  
     0.768
SMB80726.1
Arabinofuranan 3-O-arabinosyltransferase.
  
     0.767
SMB77766.1
Galactan 5-O-arabinofuranosyltransferase.
 
     0.765
SMB78840.1
Arabinofuranosyltransferase.
  
     0.764
SMB78831.1
Cutinase.
  
     0.749
SMB77567.1
Hypothetical protein.
  
     0.739
SMB77764.1
Arabinosyltransferase C.
  
     0.734
Your Current Organism:
Corynebacterium glucuronolyticum
NCBI taxonomy Id: 39791
Other names: ATCC 51860, ATCC:51866 [[Corynebacterium seminale]], C. glucuronolyticum, CCUG 35055, CCUG:34780 [[Corynebacterium seminale]], CCUG:34888 [[Corynebacterium seminale]], CIP 104577, CIP:104297 [[Corynebacterium seminale]], Corynebacterium seminale, DMMZ 838, DSM 44120, DSM 44288 [[Corynebacterium seminale]], JCM 11612, JCM:10394 [[Corynebacterium seminale]], LMG 19047, LMG:19047, strain IBS B12915 [[Corynebacterium seminale]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.