Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0010PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_4119 4Fe-4S ferredoxin, iron-sulfur binding. (86 aa)    
Predicted Functional Partners:
Aave_2105
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pol:Bpro_3279 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
 0.812
Aave_1267
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: pol:Bpro_3252 NADH-quinone oxidoreductase, E subunit.
   
 
 0.807
Aave_2202
KEGG: pol:Bpro_3602 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.787
Aave_2168
PFAM: electron transfer flavoprotein beta-subunit; KEGG: bbr:BB0620 electron transfer flavoprotein beta-subunit.
   
 
 0.720
Aave_4307
PFAM: electron transfer flavoprotein beta-subunit; KEGG: bbr:BB0620 electron transfer flavoprotein beta-subunit.
   
 
 0.720
Aave_0009
PFAM: OsmC family protein; KEGG: rru:Rru_A0580 OsmC-like protein.
       0.570
Aave_4646
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pol:Bpro_4647 pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.567
Aave_1527
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pol:Bpro_4301 4Fe-4S ferredoxin, iron-sulfur binding.
  
 
 0.520
Aave_1489
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.496
Aave_3417
PFAM: Hydratase/decarboxylase; KEGG: dar:Daro_4183 hydratase/decarboxylase.
  
     0.482
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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