Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0146TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: reu:Reut_B5864 gentisate 1,2-dioxygenase. (370 aa)    
Predicted Functional Partners:
Aave_0148
TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase, N-terminal domain; KEGG: rso:RSc1085 putative gst-related protein.
 
   
 0.697
Aave_0165
Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_0983 Rieske (2Fe-2S) region.
 
   
 0.678
Aave_0166
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: pol:Bpro_0984 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
   
 0.642
Aave_0147
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B1888 fumarylacetoacetate (FAA) hydrolase.
 
   
 0.640
Aave_0794
PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bja:bll2502 hypothetical protein.
 
   
 0.614
Aave_0145
Transcriptional regulator, LysR family; PFAM: regulatory protein, MarR; regulatory protein, LysR; LysR, substrate-binding; KEGG: reu:Reut_B5865 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
 
     0.613
maiA
Asp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
     0.564
Aave_3927
Salicylate 1-monooxygenase; PFAM: monooxygenase, FAD-binding; KEGG: bpe:BP1954 putative monooxygenase.
 
   
 0.522
Aave_0164
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_0980 oxidoreductase FAD-binding region.
 
   
 0.520
Aave_0150
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rme:Rmet_4320 transcriptional regulator, AraC family.
 
     0.472
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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