Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Aave_0160KEGG: neu:NE1363 hypothetical protein. (212 aa)    
Predicted Functional Partners:
Aave_0161
PFAM: Appr-1-p processing domain protein; KEGG: neu:NE1364 Appr-1-p processing enzyme family.
 
 
   0.985
Aave_0159
Site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bpm:BURPS1710b_0259 type III DNA modification methyltransferase.
       0.781
Aave_0162
PFAM: type III restriction enzyme, res subunit; KEGG: cte:CT0911 type III restriction system endonuclease.
       0.742
Aave_0157
PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cte:CT0906 DNA-dependent ATPase, SNF2 family protein.
       0.705
Aave_0158
KEGG: cte:CT0907 hypothetical protein.
       0.701
Aave_0156
TIGRFAM: DNA binding domain, excisionase family; KEGG: noc:Noc_0665 excisionase/Xis, DNA-binding.
       0.626
Aave_1232
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
    0.484
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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