Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Aave_0171KEGG: xcv:XCV0233 putative secreted protein. (248 aa)    
Predicted Functional Partners:
Aave_0169
PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_2232 major facilitator superfamily.
 
     0.807
Aave_0173
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: xom:XOO_3970 two-component system sensor protein.
 
     0.727
Aave_0170
Hypothetical protein.
       0.668
Aave_4296
PFAM: Carbohydrate binding family 6; KEGG: xac:XAC0817 hypothetical protein.
  
     0.652
Aave_2924
PFAM: glycoside hydrolase, family 5; KEGG: xcv:XCV0358 putative cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.651
Aave_0538
KEGG: xac:XAC2247 hypothetical protein.
  
     0.621
Aave_3626
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rso:RSc0245 hypothetical/unknown protein.
  
     0.596
Aave_0444
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bma:BMAA1621 regulatory protein HrpB.
  
     0.575
Aave_0172
Sigma54 specific transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: xac:XAC0226 two-component system regulatory protein.
       0.468
Aave_3155
KEGG: mxa:MXAN_6813 hypothetical protein.
  
     0.437
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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