Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0351KEGG: pol:Bpro_0295 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Aave_0352
PFAM: PTS system fructose subfamily IIA component; KEGG: pol:Bpro_0297 PTS system fructose subfamily IIA component.
 
     0.798
Aave_1882
KEGG: rfr:Rfer_1400 hypothetical protein.
  
     0.774
Aave_0353
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: pol:Bpro_0298 HPrNtr.
       0.768
Aave_3114
KEGG: rfr:Rfer_3320 putative transmembrane protein.
  
     0.740
Aave_4672
PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4664 protein of unknown function DUF1289.
  
     0.731
Aave_3901
KEGG: rfr:Rfer_1687 hypothetical protein.
  
     0.730
Aave_0365
KEGG: rfr:Rfer_0113 putative ATP synthase protein I.
  
     0.729
Aave_0920
KEGG: pol:Bpro_1326 hypothetical protein.
  
     0.720
Aave_0918
PFAM: type II secretion system protein N; KEGG: rfr:Rfer_0541 putative general secretory pathway N transmembrane protein.
  
     0.718
Aave_4187
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
     0.718
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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