Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0413PFAM: PsiF repeat protein; KEGG: rfr:Rfer_0772 PsiF. (121 aa)    
Predicted Functional Partners:
Aave_2673
PFAM: AsmA family protein; KEGG: bbr:BB4152 exported protein, conserved.
  
    0.706
Aave_0415
PFAM: Sporulation domain protein; KEGG: rfr:Rfer_0774 sporulation related.
       0.684
argS
KEGG: rfr:Rfer_0773 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase.
       0.678
Aave_4170
PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: eba:ebA3069 conserved hypothetical protein, probably involved in cell wall turnover.
  
    0.621
Aave_0416
PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_4488 DsbA oxidoreductase.
       0.515
Aave_1039
KEGG: rso:RSc2272 probable transmembrane protein.
  
     0.477
Aave_1304
PFAM: Cupin 2, conserved barrel domain protein; KEGG: rme:Rmet_5777 cupin 2, conserved barrel.
  
     0.477
Aave_0273
PFAM: protein of unknown function DUF1228; KEGG: pol:Bpro_1488 protein of unknown function DUF1228.
  
     0.463
Aave_2809
KEGG: pol:Bpro_1681 hypothetical protein.
  
     0.447
Aave_0223
PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_0175 17 kDa surface antigen.
  
     0.445
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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