Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0450TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bpm:BURPS1710b_A0677 type III secretion inner membrane protein SctQ. (352 aa)    
Predicted Functional Partners:
Aave_4388
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rfr:Rfer_0557 flagellar motor switch protein FliM.
  
 
 0.964
Aave_4394
PFAM: flagellar motor switch protein FliG; KEGG: rfr:Rfer_0551 flagellar motor switch protein FliG.
  
 
 0.955
Aave_4429
Flagellar rod assembly protein/muramidase FlgJ; KEGG: rfr:Rfer_3722 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
  
  
 0.950
Aave_2417
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.944
Aave_0449
TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein; KEGG: rso:RSp0860 hrp conserved hrcR transmembrane protein.
  
  
 0.942
Aave_4421
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3715 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
 
 0.932
Aave_0448
TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ, family 3; KEGG: rso:RSp0859 hrp conserved hrcS transmembrane protein.
  
  
 0.918
Aave_0452
TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bma:BMAA1630 type III secretion inner membrane protein SctV.
  
  
 0.894
Aave_4425
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3719 flagellar basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.
  
 
 0.894
Aave_4742
PFAM: flagellar basal body rod protein; KEGG: xac:XAC2539 hypothetical protein.
  
 
 0.893
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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