Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_0502KEGG: xac:XAC2274 hypothetical protein. (978 aa)    
Predicted Functional Partners:
Aave_0503
KEGG: xcb:XC_2032 hypothetical protein.
 
     0.950
Aave_0504
KEGG: xac:XAC2273 hypothetical protein.
 
     0.950
Aave_0505
KEGG: xac:XAC2272 hypothetical protein.
 
     0.950
Aave_0506
KEGG: bxe:Bxe_A1188 hypothetical protein.
 
     0.950
Aave_0507
KEGG: xac:XAC2271 hypothetical protein.
 
     0.950
Aave_0501
KEGG: xac:XAC2275 hypothetical protein.
 
     0.942
Aave_0735
PFAM: conjugation TrbI family protein; KEGG: rso:RSc2575 probable conjugal transfer trbi transmembrane protein.
  
 
 0.885
Aave_0508
KEGG: xac:XAC2270 hypothetical protein.
       0.803
Aave_0527
KEGG: eba:ebA2421 hypothetical protein.
 
  
 0.796
Aave_0489
KEGG: xac:XAC2284 hypothetical protein.
 
 
   0.790
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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