Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0573PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_4423 FAD dependent oxidoreductase. (390 aa)    
Predicted Functional Partners:
Aave_0120
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rfr:Rfer_3884 arginase; Belongs to the arginase family.
  
 
 0.909
Aave_3257
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pol:Bpro_2415 lysine decarboxylase.
     
  0.900
Aave_0572
PFAM: MmgE/PrpD family protein; KEGG: mlo:mll9010 hypothetical protein.
 
    0.855
Aave_1945
PFAM: fumarate lyase; KEGG: reu:Reut_A1775 argininosuccinate lyase.
  
  
 0.829
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: rfr:Rfer_1710 argininosuccinate lyase.
     
 0.804
Aave_0571
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4421 transcriptional regulator, LysR family.
 
     0.586
Aave_2554
D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: bja:bll6812 putative dehydrogenase.
  
     0.583
Aave_2186
PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_0057 FAD dependent oxidoreductase.
 
   
 0.534
Aave_2184
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_0054 GCN5-related N-acetyltransferase.
  
     0.478
Aave_4405
PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3336 FAD dependent oxidoreductase.
  
     0.470
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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