Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0599PFAM: glycosyl transferase, family 2; KEGG: lpn:lpg2478 glycosyltransferase, group 2 family protein (glycan biosynthesis). (343 aa)    
Predicted Functional Partners:
Aave_0597
KEGG: bbr:BB4267 hypothetical protein.
 
  
 0.948
Aave_0600
KEGG: reu:Reut_B3508 putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family.
 
  
 0.886
Aave_0598
PFAM: GtrA family protein; KEGG: mfa:Mfla_1376 GtrA-like protein.
 
  
 0.859
Aave_4142
PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2.
  
 
 0.624
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
    0.568
Aave_0952
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cvi:CV4124 probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.530
Aave_4330
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvu:DVUA0045 aminotransferase, DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.466
Aave_4064
Hypothetical protein; KEGG: mta:Moth_2476 transporter.
  
  
 0.428
Aave_4328
KEGG: pfl:PFL_4879 hypothetical protein.
  
  
 0.428
kynA
Tryptophan 2,3-dioxygenase apoenzyme / Tryptophan 2,3-dioxygenase holoenzyme; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
   0.424
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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