Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Aave_0771KEGG: pol:Bpro_2110 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Aave_2648
KEGG: pol:Bpro_2272 putative signal peptide protein.
  
    0.920
Aave_2869
KEGG: rfr:Rfer_2490 putative glutathione S-transferase-related protein.
  
     0.533
Aave_4756
MlrC domain protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.521
Aave_3942
KEGG: reu:Reut_B3888 hypothetical protein.
  
     0.492
Aave_0770
Amidohydrolase; KEGG: pol:Bpro_2111 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.474
Aave_4084
KEGG: rfr:Rfer_3513 hypothetical protein.
  
     0.460
Aave_0769
TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_2527 acetylornithine deacetylase (ArgE); Metallo peptidase; MEROPS family M20A.
 
     0.450
Aave_0772
PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B2682 methyl-accepting chemotaxis sensory transducer.
       0.438
Aave_0166
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: pol:Bpro_0984 aromatic-ring-hydroxylating dioxygenase, beta subunit.
  
     0.432
Aave_3303
PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3076 major facilitator superfamily MFS_1.
  
     0.429
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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