Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0860TIGRFAM: MJ0042 family finger-like protein; KEGG: rme:Rmet_3067 zinc finger/thioredoxin putative. (532 aa)    
Predicted Functional Partners:
prmA
[LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
  
    0.754
Aave_0861
PFAM: PfkB domain protein; KEGG: pol:Bpro_1103 PfkB.
 
     0.736
Aave_0842
TIGRFAM: TonB family protein; KEGG: pol:Bpro_1088 TonB-like.
 
     0.636
Aave_1443
KEGG: rfr:Rfer_2980 conserved hypothetical signal peptide protein.
  
    0.599
Aave_0858
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.596
Aave_1997
PFAM: protein of unknown function DUF513, hemX; KEGG: rfr:Rfer_1717 protein of unknown function DUF513, HemX.
  
     0.590
Aave_0843
PFAM: ribonuclease II; KEGG: pol:Bpro_1089 ribonuclease II.
 
     0.568
Aave_0903
PFAM: CheW domain protein; KEGG: pol:Bpro_1138 CheW-like protein.
  
     0.554
Aave_4630
PFAM: Sporulation domain protein; KEGG: pol:Bpro_4717 putative signal peptide protein.
  
     0.550
Aave_0809
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.547
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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