Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0897Hypothetical protein; KEGG: rso:RSc2775 probable harpin-related protein. (361 aa)    
Predicted Functional Partners:
Aave_2102
Cellulase; PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; KEGG: xcb:XC_0639 cellulase.
 
 
 0.883
Aave_3626
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rso:RSc0245 hypothetical/unknown protein.
  
     0.605
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_1133 glutamate-1-semialdehyde-2,1-aminomutase.
     
 0.547
Aave_0899
PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pol:Bpro_1134 putative phosphomethylpyrimidine kinase.
       0.532
Aave_2271
PFAM: porin, Gram-negative type; KEGG: rso:RSc2136 probable porin signal peptide protein.
  
    0.517
Aave_3396
Rare lipoprotein A; PFAM: cellulose-binding, family II; Rare lipoprotein A; KEGG: hch:HCH_03669 endoglucanase C-terminal domain/subunit and related protein.
  
     0.515
Aave_4216
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase.
  
 
 0.515
Aave_3590
PFAM: glycoside hydrolase, family 10; KEGG: xom:XOO_4171 secreted xylanase.
 
 
 
 0.511
Aave_1035
KEGG: rso:RS01997 hypothetical signal peptide protein.
 
  
 0.505
Aave_0018
KEGG: rso:RS03064 hypothetical protein.
  
     0.479
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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