Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_0920KEGG: pol:Bpro_1326 hypothetical protein. (416 aa)    
Predicted Functional Partners:
Aave_0918
PFAM: type II secretion system protein N; KEGG: rfr:Rfer_0541 putative general secretory pathway N transmembrane protein.
 
   
 0.956
Aave_0921
PFAM: General secretion pathway protein K; KEGG: pol:Bpro_1325 general secretion pathway protein K.
 
  
 0.947
Aave_0919
KEGG: pol:Bpro_1327 hypothetical protein.
  
 
 0.931
Aave_4153
PFAM: Fimbrial assembly family protein; KEGG: eba:ebA1610 hypothetical protein, INTERPRO suggestion: probable fimbrial assembly.
     
 0.906
Aave_0916
KEGG: pol:Bpro_1330 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase.
  
 
 0.901
Aave_0917
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: pol:Bpro_1329 type II and III secretion system protein.
 
  
 0.895
Aave_0923
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pol:Bpro_1323 general secretion pathway protein I.
 
  
 0.893
Aave_0924
TIGRFAM: general secretion pathway protein H; KEGG: rfr:Rfer_0535 general secretion pathway protein H.
 
  
 0.875
Aave_0922
Type II secretory pathway component; KEGG: pol:Bpro_1324 methylation.
     
 0.780
Aave_4160
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.770
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.