Aave_0933 protein (Acidovorax citrulli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Aave_0933

PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type. (374 aa)

Predicted Functional Partners:

Aave_4689

0.740

Aave_0932

0.721

Aave_3386

0.657

Aave_3115

0.622

Aave_3837

0.622

Aave_1383

0.578

Aave_1579

0.566

Aave_2601

0.560

Aave_4343

0.548

Aave_4344

0.546

Your Current Organism:

Acidovorax citrulli

NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Aave_0932	Aave_0933	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type.	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	0.721
Aave_0932	Aave_3386	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type.	KEGG: pol:Bpro_1834 hypothetical protein.	0.561
Aave_0932	Aave_4343	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type.	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_1907 porin, gram-negative type.	0.520
Aave_0932	Aave_4344	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type.	PFAM: porin, Gram-negative type; KEGG: reu:Reut_B5850 porin, gram-negative type.	0.521
Aave_0932	Aave_4689	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type.	KEGG: pol:Bpro_0388 putative lipoprotein transmembrane.	0.606
Aave_0933	Aave_0932	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type.	0.721
Aave_0933	Aave_1383	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	Putative membrane protein; KEGG: rso:RSc0548 hypothetical protein.	0.578
Aave_0933	Aave_1579	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	KEGG: rme:Rmet_1193 hypothetical protein.	0.566
Aave_0933	Aave_2601	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	KEGG: mlo:mlr7906 hypothetical protein.	0.560
Aave_0933	Aave_3115	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	Hypothetical protein; KEGG: rfr:Rfer_3319 putative transmembrane protein.	0.622
Aave_0933	Aave_3386	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	KEGG: pol:Bpro_1834 hypothetical protein.	0.657
Aave_0933	Aave_3837	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	KEGG: pol:Bpro_0908 putative lipoprotein.	0.622
Aave_0933	Aave_4343	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_1907 porin, gram-negative type.	0.548
Aave_0933	Aave_4344	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	PFAM: porin, Gram-negative type; KEGG: reu:Reut_B5850 porin, gram-negative type.	0.546
Aave_0933	Aave_4689	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	KEGG: pol:Bpro_0388 putative lipoprotein transmembrane.	0.740
Aave_1383	Aave_0933	Putative membrane protein; KEGG: rso:RSc0548 hypothetical protein.	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	0.578
Aave_1383	Aave_1579	Putative membrane protein; KEGG: rso:RSc0548 hypothetical protein.	KEGG: rme:Rmet_1193 hypothetical protein.	0.550
Aave_1383	Aave_2601	Putative membrane protein; KEGG: rso:RSc0548 hypothetical protein.	KEGG: mlo:mlr7906 hypothetical protein.	0.444
Aave_1383	Aave_4689	Putative membrane protein; KEGG: rso:RSc0548 hypothetical protein.	KEGG: pol:Bpro_0388 putative lipoprotein transmembrane.	0.461
Aave_1579	Aave_0933	KEGG: rme:Rmet_1193 hypothetical protein.	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.	0.566

page 1 of 3

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About