Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_0962KEGG: sth:STH1376 hypothetical protein. (378 aa)    
Predicted Functional Partners:
Aave_0963
PFAM: glycosyl transferase, group 1; KEGG: eba:ebA1527 mannosyltransferase.
 
     0.799
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.603
Aave_2984
Maltooligosyl trehalose hydrolase; KEGG: tbd:Tbd_1173 alpha amylase, catalytic subdomain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
   
 0.603
Aave_1137
KEGG: rfr:Rfer_0242 hypothetical protein.
  
 
 0.543
Aave_0961
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: bbr:BB0142 putative glutamine amidotransferase.
     
 0.468
Aave_4018
Hypothetical protein.
  
     0.441
Aave_0953
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: tth:TTC0285 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.431
Aave_0955
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: noc:Noc_1228 ABC transporter, ATPase subunit.
  
 
 0.431
Aave_0948
KEGG: dar:Daro_2389 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.412
Aave_0954
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_5495 ABC-2 type transporte.
  
  
 0.403
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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