STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_1073PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase. (364 aa)    
Predicted Functional Partners:
Aave_1074
KEGG: eba:ebA5933 transposition helper protein.
 
     0.937
Aave_3797
KEGG: eba:ebA5933 transposition helper protein.
  
     0.742
Aave_0695
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_0719
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_1104
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_1518
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_1906
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_2136
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_2426
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Aave_2774
KEGG: eba:ebA5933 transposition helper protein.
  
     0.736
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.